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Folmer Bokma Print E-mail

A central issue in evolutionary biology is whether differences between species gradually develop over millions of years, or quickly upon speciation - a pattern known as "punctuated equilibrium". I use computation-intensive analyses of molecular phylogenetic data to estimate rates of evolution: speciation rates, extinction rates, and rates of gradual and speciational change of morphology, gene expression, co-expression, gene family size, sequence divergence etc.

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folmer_bokma
PI: Folmer Bokma

I currently have two post-doc positions open. Please check the research goup homepage:

Research group

Last Updated ( Monday, 23 March 2009 )
 
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Publications
 
Johansson F., Söderquist M. and Bokma F.
Insect wing shape evolution: independent effects of migratory and mate guarding flight on dragonfly wings
Biological Journal of the Linnean Society 2009 97: 362–372
 
Bokma F.
Detection of “punctuated equilibrium” by Bayesian estimation of speciation and extinction rates, ancestral character states, and rates of anagenetic and cladogenetic evolution on a molecular phylogeny
Evolution 2008 62: 2718-2726
 
Mattila T.M., Bokma F.
Extant mammal body masses suggest punctuated equilibrium
Proc. Roy. Soc. B. 2008 275: 2195-2199
 
Bokma F.
Bayesian estimation of speciation and extinction rates from (in)complete phylogenies
Evolution 2008 62: 2441-2445
 
Nyman T., Bokma F., Kopelke J.P.
Reciprocal diversification in a complex plant-herbivore-parasitoid food web
BMC Biology 2007 5:49
 
Savolainen O., Bokma F., Knürr T., Kärkkäinen K., Pyhäjärvi T., Wachowiak W.
Adaptation of forest trees to climate change
In: Koskela, J., Buck, A. and Teissier du Cros, E., editors. Climate change and forest genetic diversity: Implications for sustainable forest management in Europe.
Biodiversity International, Rome, Italy, 2007 pp. 19-30.
 
Mönkkönen M., Forsman J.T., Bokma F.
Energy availability, abundance, energy-use and species-richness in forest bird communities: a test of the species-energy theory
Global Ecology and Biogeography 2006 15: 290-302
 
Bokma F.
Artificial neural networks can learn to estimate extinction rates from molecular phylogenies
Journal of Theoretical Biology 2006 243: 449-54
 
Bokma F.
Differential rates of body size evolution in birds
Journal of Evolutionary Biology 2004 17: 933–940
 
Savolainen O., Bokma F., García-Gil R., Komulainen P., Repo T.
Genetic variation in cessation of growth and frost hardiness and consequences for adaptation of Pinus sylvestris to climatic changes
Forest Ecology and Management 2004 197: 79-89
 
Bokma F.
Evidence against universal scaling of metabolic rate
Functional Ecology 2004 18: 184-187
 
Bokma F.
Testing for differences in rates of speciation between higher taxa
Evolution 2003 57: 2469-2474
 
Bokma F.
A statistical test of unbiased evolution of body size in birds
Evolution 2002 56: 2499-2504
 
Bokma F.
Detection of punctuated equilibrium from molecular phylogenies
Journal of Evolutionary Biology 2002 15: 1048-1056.
 
Bokma F.
Evolution of body size: limitations of an energetic definition of fitness
Functional Ecology 2001 15: 696-699
 
Bokma F. Mönkkönen M.
The mid-domain effect and the longitudinal dimension of continents
Trends in Ecology and Evolution 2001 15: 288-289
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